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    <title>Ortholog</title>
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   <id>tag:www.ortholog.com,2008://2</id>
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    <updated>2008-09-08T04:40:18Z</updated>
    <subtitle>ortholog.com: commonplacings, preponed futures, brainworthy memes, paradigm fragments, rigorously conceived musings, gists, free association on free science, stuff I have nowhere else to put. All the opinions and interpretations are my own. This site exists neither for nor despite you, but you are more than welcome to read it.</subtitle>
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<entry>
    <title>I tend to default</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/deserving_memes/i_tend_to_default.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=789" title="I tend to default" />
    <id>tag:www.ortholog.com,2008://2.789</id>
    
    <published>2008-09-08T04:39:02Z</published>
    <updated>2008-09-08T04:40:18Z</updated>
    
    <summary>http://www.boston.com/bostonglobe/ideas/articles/2008/08/31/daydream_achiever/?page=full...</summary>
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        <name></name>
        
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        <category term="Deserving memes" />
    
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        http://www.boston.com/bostonglobe/ideas/articles/2008/08/31/daydream_achiever/?page=full
        <![CDATA[&quot;[D]aydreaming is a fundamental feature of the human mind - so fundamental, in fact, that it's often referred to as our &quot;default&quot; mode of thought.&quot;]]>
    </content>
</entry>

<entry>
    <title>Bad but built-in</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/writ/bad_but_builtin.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=788" title="Bad but built-in" />
    <id>tag:www.ortholog.com,2008://2.788</id>
    
    <published>2008-08-02T11:06:06Z</published>
    <updated>2008-08-02T11:10:45Z</updated>
    
    <summary>Religion and pornography - society would benefit from the elimation of either but, unfortunately, people, being human, would reintroduce them....</summary>
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        <name></name>
        
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        <category term="Writ" />
    
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        <![CDATA[<p>Religion and pornography - society would benefit from the elimation of either but, unfortunately, people, being human, would reintroduce them.</p>]]>
        
    </content>
</entry>

<entry>
    <title><![CDATA[&quot;Never bet against bacteria&quot;]]></title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/science_seen/never_bet_against_bacteria.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=785" title="&amp;quot;Never bet against bacteria&amp;quot;" />
    <id>tag:www.ortholog.com,2008://2.785</id>
    
    <published>2008-06-26T03:35:32Z</published>
    <updated>2008-06-26T03:37:43Z</updated>
    
    <summary>http://kk.org/ct2/2008/06/the-unclear-origins-of-oil.php...</summary>
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        http://kk.org/ct2/2008/06/the-unclear-origins-of-oil.php
        So says Kevin Kelly in a note about the unclear origins of oil. This is wisdom beyond the topic at hand: for biotechnology, for technology, for biology, never ever bet against bacteria.
    </content>
</entry>

<entry>
    <title>Why aliens aren&apos;t Here</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/writ/why_aliens_arent_here.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=768" title="Why aliens aren't Here" />
    <id>tag:www.ortholog.com,2008://2.768</id>
    
    <published>2008-06-02T00:02:26Z</published>
    <updated>2008-06-14T08:29:18Z</updated>
    
    <summary>In 1950 Enrico Fermi asked a question. It was a really good question. His question still orbits the hallways of university astronomy departments, echoes off the domes of Keck and Arecibo, pops up on sites and boards in cyberspace. The...</summary>
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        <![CDATA[<p>In 1950 Enrico Fermi asked a question. It was a really good question. His question still orbits the hallways of university astronomy departments, echoes off the domes of Keck and Arecibo, pops up on sites and boards in cyberspace. The Search for Extraterrestrial Intelligence -- seekers of little green men near and far, hunters for things that go blip in the night in a statistically significant way -- must pay attention to what Fermi asked. Faced with the statement that there must be life elsewhere in the universe, Fermi asked, &quot;<em>Where are They</em>?&quot;</p>
<p>This has come to be called Fermi's Paradox. It isn't a paradox but it is a bloody good question. It is a much better question than, Is there life elsewhere in the universe?  Better because &quot;So what?&quot; isn't one possible honest answer to Fermi's question. A lot of thinking has since gone into providing answers (or ducking the question) -- <a href="http://en.wikipedia.org/wiki/Fermi%27s_paradox">see Wikipedia for details</a>. I think it is interesting how the mood of the times and the sensibilities of successive generations have affected the search for possible answers to Fermi's Pointed Question.</p>]]>
        <![CDATA[<p>Fermi was a nuclear physicist. He build the first self-sustaining atomic pile, a slow nuclear reaction that pulsed for fifty years in a lead-lined racquets court at Chicago University. He is one of the fathers of the atomic bomb and the generation that grew up with his progeny was so influenced by it that they used the flash and the fallout to provide their best answer. Which was that life elsewhere in the universe is not here on Earth because it invariably annihilates itself in total nuclear war. The theory goes that to harness the power of the atom is to make a species-wide commitment towards inevitable extinction. Professor Fermi, the answer is this: <em>They are not Here because They wiped Themselves out</em>.</p>
<p>All well and good, if unsatisfying. The nuclear generation, cowering under beds and desks during the drills, wetting themselves in fear of intercontinental ballistic death, thought that intelligent life <em>There</em> must inevitably die in the atomizing flash or in the post-holocaust wreckage before it could get <em>Here</em>. Perhaps the survivors fall back into a dark age. Worse, perhaps <em>They</em> rise periodically to high civilization before foolishly reinventing their destruction time and again, stuck in a radioactive rut, joke's on them. <em>They aren't Here because They're too busy either splitting atoms or splitting rocks</em>. And, portentously, perhaps this may be our fate&hellip;</p>
<p>Bummer.</p>
<p>That was not the nuclear generation's only answer to Fermi's Pointed Question. Bleak and pessimistic as the times seemed to many, it got worse. Another answer could be that there is no life elsewhere. <em>There is no They to be the subject of &quot;Where are They?&quot;</em>. Human beings are alone in the universe and are daft enough to be messing with nukes?! At least the purported absence of life leads to interesting questions like &quot;Why not?&quot; </p>
<p>Another, less depressing answer is that there is indeed intelligent life developing around other stars but that we are simply the leaders, the first to send radio signals to aliens too primitive to receive them. <em>They are not Here because They can't be, yet.</em> This smacks of human arrogance and, until we have evidence that we are special, we should assume we are ordinary. It's taken us 30,000 years to get from cave painting to Pioneer - with sixteen billion years and billions of solar systems, are we seriously entertaining the idea that we are first in this galaxy, let alone the universe?</p>
<p>As physics gets the hang of Einstein, another possibility occurs: that intelligence is scarce in the universe and the gaps are forever unbridgeable because the speed limits of physical laws keep us apart - <em>They are not Here because They can't be, ever.</em> This is hard to reconcile with the universe: it's a big universe but it's also been around for so very long that, even if <em>They</em> only travel at a fraction of the speed of light, <em>They've</em> had plenty time to get <em>Here</em> if they are even approximately in our neighbourhood. There's scarce and then there's <em>really</em> scarce. So scarce that their signals aren't here yet? Perhaps, say the pessimists, the gaps are so large that they require an advanced hyperdrive few species manage to develop and so <em>They aren't Here&hellip;but watch the skies!</em> Doubtful; it only has to happen once in the aforementioned big universe. Or an advanced hyperdrive requires six impossible things, in which case <em>They aren't Here and you're wasting your time watching the skies</em>.</p>
<p>Sheesh! Can somebody cheer us up? Well, nuclear technology begat the IT generation and a new and happier riposte to Fermi. Intelligent life, thought the first geeks as they stumbled one-eyed (the other eye looking into cyberspace) through drab <acronym>RL</acronym> (real life) -- intelligent life, they thought, if it skips by early armageddon, develops information technology to the point where <em>They</em> choose inner over outer space. Space exploration is costly and dangerous and sort of pointless. Instead, aliens from here to Stavromula Beta learn how to upload <em>Themselves</em> into alternative realities, never leaving home. Cyberspace is destiny and maximizing felicific calculus is what it is all about. Why fret and sweat in the real world when you can take the 'trode road to paradise? Why go out when there's all this great stuff on TV? Perhaps civilizations first surround their star with a shell of solar panels, hiding it from view and harvesting vast quantities of energy which they can use to power their silicon heavens, their backed-up jacked-up matrices. Then <em>They</em> disappear up their own input port, leaving mundane reality to spin mechanically onwards while <em>They</em> cavort for subjective eternities in heavens of <em>Their</em> own devising. <emThey aren't Here because They're too busy having a good time There.</em></p>
<p>The IT revolution begat the genomics revolution as the technology gave us the capability to handle life's diversity. A billion bases and biopsies ordered as bits and bytes. The biotechnology generation took on the earlier responses to Fermi first then launched into the master himself. First, they repudiated the nuclear pessimists as overly concerned with their own destructive power. Hype to the contrary, the destruction of life on Earth can't be achieved with any likely extrapolation of today's arsenals; only civilization is a legitimate target and there's always the chrysalids in New Zealand or Kamandi in the midwest to carry the torch. Surely we can't all die, right? Cycles of rise and fall, upskill then fallout - and you are seriously suggesting that nobody gets out alive with a working transmitter and the will to pass on the bad news to the solar system next door? Give us a break!</p>
<p>Then they mocked the geeks. Overly optimistic, you see? Pessimism is not confined to the nuclear generation. No, said the biotechnology generation (repudiating its repudiation), advanced intelligence in the universe proceeds to the point that it discovers how to manipulate its own substrate, to tinker with itself. The approaching abyss is a biological hurdle, not a nuclear chasm. This goes for plasmatic organisms, sentient star hearts, superintelligent shades of the colour blue, whatever esoteric form life takes. A couple of billion years of evolution builds a system -- carbon- or plasma- or photon-based -- of staggering complexity, shored up and Rube-Goldberg'd together in ways that are all too easy to break with only a generation's practice. Aliens invent superbugs and megaviruses, diseases with 99.9% morbidity, agricultural monocultures that become single points of failure for <wm>Their</em> entire society. Or aliens invent nanotechnology, which after all is just a variant of biotechnology, just biologically-inspired manufacturing taken to the final degree, and then grey goo <em>Themselves</em> away. Von Neumanned into oblivion, <em>They aren't Here because They've sawn away the branch They were sitting on.</em></p>
<p>Now who's bumming us out?</p>
<p>Every technological revolution finds its own answer to Fermi. The cognitive scientists are up next. They're honing their answers right now, in the scientific and popular literatures: that there are snowcrash memes lurking around every creative corner, that Langford hacks for all sensory modes are inherent in mathematical representations discovered by all species, or that there are gestalt minds to build that, sans silicon, will take us to the rapturous heavens in our heads towards which the geeks were programming us. That last one might work and contains hidden hopes: <em>They aren't Here because Their childhood ended (and everyone knows that grown-ups don't get out much).</em></p>
<p>Of course, it's never that simple. Nuclear didn't begat IT who begat biotech who begat cognitive and whatever is to come next. Disciplines overlapped and interacted and exchanged ideas and personnel, while there was a lot of other stuff going on too. But it seems that many fields of science offer a pessimistic answer to Fermi's Pointed Question. IT and its cognitive variant are unusual in the lack of bleakness in some of their answers, though they hardly fall short in the nihilism department. Particle physicists, on the other hand, worry in their unguarded moments that the next superduper supercollider will exceed some hitherto-unsuspected energy threshhold in the substructure of the universe, smashing not only the accelerated protons under study but also the surprisingly fragile (mem)brane keeping the universes apart, tearing open a hole in the universe and tipping the Earth into the fires between realities like dropping the pizza face-down as you open the oven door. Or some student working late at CERN will accidentally create a black hole that plunges to the centre of the Earth and spends a few years sucking the planet from under our feet. The counter-Fermian is obvious: <em>They aren't Here because the universe ate Them.</em></p>
<p>Down the corridor, astronomers count the number of fast-moving city-sized rocks hurtling through space, or the oscillations of a solar system through the galactic plane into areas exposed to collosal blasts of interstellar dust or constellation-wide sheets of searing radiation, and conclude that <em>They aren't Here because They are pounded or irradiated or suffocated by what is, on the scale of galaxies, merely a fluctuation in local weather conditions</em>.</p>
<p>Across the courtyard in the shabbier buildings, the humanities are just as bad: students of human nature extrapolate from the colonial era and conclude that intelligent life proceeds to a point where it is sufficiently developed to come to the notice of the first species that got intelligent enough. This first-comer species, in recognition of the danger posed by upstarts, turns up beweaponed and hand-delivers the obliteration the universe has failed to provide. In this scenario, life is self-limiting. <em>They aren't Here because either (a) They have been oppressed or (b) They are the intergalactic opressors who have yet to notice us.</em> In which case, why are we beaming signals in all directions at light speed? Not so much &quot;Hello universe&quot; as &quot;Come and get us&quot;. To Fermi we say: <em>Actually, any minute now They will be Here and, er, shortly after that we won't be</em>.</p>
<p>Fermi didn't have an answer either. Where the hell is he!?</p>
<p>And it also applies to time-travellers -- where are they?</p>]]>
    </content>
</entry>

<entry>
    <title>Post-migratory brain misorientation disease</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/science_seen/postmigratory_brain_misorientation_disea.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=751" title="Post-migratory brain misorientation disease" />
    <id>tag:www.ortholog.com,2008://2.751</id>
    
    <published>2008-05-04T23:24:24Z</published>
    <updated>2008-05-04T23:30:54Z</updated>
    
    <summary>http://dx.doi.org/10.1038/nature06834...</summary>
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        http://dx.doi.org/10.1038/nature06834
        <![CDATA[Maeda and coworkers disclose a biologically plausible chemical reaction that is perturbed by the Earth's magnetic field. That birds perceive the field is uncontroversial (same for some fish, bees, and some others) - exactly how is a mystery. A lot of promising leads point to haematite accretions in the brain but Maeda (and others) think about free radicals generated by photochemical pigments. Whatever the mechanism, you have to presume, given the phylogenetic distribution of magnetoception (surely not &quot;magneto<strong>re</strong>ception&quot;), that the reactions are ubiquitous even if only the birds and the bees and the rest have figured out how to use them. Carrubba et al. (2006; doi: <a href="http://dx.doi.org/10.1016/j.neuroscience.2006.08.068">10.1016/j.neuroscience.2006.08.068</a>) suggest humans may have it. Not sure that's compelling but, leaving science for anecdote, I remember feeling profoundly disjointed and geographically bamboozled for several months after migrating from the northern hemisphere to the southern. It happened only on sunny days and I have to wonder whether some unconscious process was struggling to come to terms with apparently mismatched sensory data from the eyes (sun on my left as I commuted south for work in the mornings) with a magnetosense telling me I was heading polewards (which all my life until then had meant northwards). At the time I put it down to the coriolis effect affecting the regular tides of pre-aggregated prions swirling around in the wide open spaces of my brain but this magnetoception idea is (infinitesimally) more scientific (yeah right). Discomfort caused by inability to process conflicting visual and magnetoceptive information would be analogous to the unmanageable mismatch between sight and equilibrioception that results in seasickness. Wow, did I just invent a new syndrome? Hope it gets named after me. Just got to wait for science to catch up now&hellip;]]>
    </content>
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<entry>
    <title>The taste of the brain</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/science_seen/the_taste_of_the_brain.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=750" title="The taste of the brain" />
    <id>tag:www.ortholog.com,2008://2.750</id>
    
    <published>2008-04-22T03:35:53Z</published>
    <updated>2008-05-04T22:34:42Z</updated>
    
    <summary>http://neuroanthropology.wordpress.com/2008/04/21/the-sugar-made-me-do-it/...</summary>
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        http://neuroanthropology.wordpress.com/2008/04/21/the-sugar-made-me-do-it/
        <![CDATA[On Neuroanthropology, dlende talks about the De Araujo paper where mice without the ability to identify sweet tastes still consume more sweet things because their mesolimbic dopamine system is stimulated. He then talks about the &quot;common assumption that what we eat relies on conditioned preference&quot; and how this underlies the theory that our dietary preferences evolved in a sugar- and fat-limited Pleistocene and lead us to obesity and heart disease in modern Western times of plenty. The paper shows that pure calorific content, as well as the mouthfeel of fats and the sweetness of sugar, can drive our consumption. In other words, taste isn't just on the tongue. Um, well, yeah. Of course. I didn't know we didn't know that. Surely no-one seriously thought that the tongue was the only feedback on dietary quality we have? Food preference can't explain pregnancy cravings, or cannibalism under duress, or the sugar rush - and was hunger thought to exist only in the stomach and satiety in the stomach walls? Why assume a highly evolved and billennially robust system has no redundancy? Perception of sweetness is as a proxy for highly bioavailable carbohydrate and the mouse experiments also show that a simple knockout can remove sweetness perception - if that (or learned preferences) was the only way to determine what food is the best fuel for sprinting after game or from tigers then we'd be extinct long before we invented gene knockouts.]]>
    </content>
</entry>

<entry>
    <title>Use at own risk</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/quotes/use_at_own_risk.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=749" title="Use at own risk" />
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    <published>2008-04-14T00:44:55Z</published>
    <updated>2008-04-14T01:37:46Z</updated>
    
    <summary><![CDATA[ &quot;The brain is not a Reality-Recorder. There is no perfect replica of reality inside our brains. The brain elides, confabulates, conflates, denies, suppresses, evades, confuses and distorts. It has its own agenda and can even work at cross-purposes with...]]></summary>
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        <![CDATA[<blockquote>
<p>&quot;The brain is not a Reality-Recorder. There is no perfect replica of reality inside our brains. The brain elides, confabulates, conflates, denies, suppresses, evades, confuses and distorts. It has its own agenda and can even work at cross-purposes with our conscious selves. Consciously, we may think that we see all and know all, but our brains may be "blind" to much of what is going on around us.&quot;</p>
</blockquote>
<p>Errol Morris, <a href="http://morris.blogs.nytimes.com/2008/04/03/play-it-again-sam-re-enactments-part-one/index.html">blogging on perception</a></p>]]>
        
    </content>
</entry>

<entry>
    <title>Tune in, turn on, publish or perish</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/science_seen/tune_in_turn_on_publish_or_perish.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=748" title="Tune in, turn on, publish or perish" />
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    <published>2008-04-13T23:20:45Z</published>
    <updated>2008-04-14T00:41:31Z</updated>
    
    <summary>http://www.futurepundit.com/archives/005132.html...</summary>
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        http://www.futurepundit.com/archives/005132.html
        <![CDATA[(Blog entry about a <em><cite>Nature</cite></em> story on the surprisingly prevalent use by scientists' of cognitive enhancers i.e. brainbooster drugs)<br />
This is a big ugly beast slowly stirring in its cage, it seems to me. Consider this: it seems possible that we will discover that cunning use of cognitive enhancement via drugs such as beta blockers is positively correlated to some degree with science quality or pace of innovative output or somesuch. In fact we may know that already - this future is probably just another imperfectly distributed one! Given that, what incentives do you create when you set up a competitive funding process, or require researchers to attain a certain standard before tenure-track, or tie promotion to patents and impact factors? The old academic fallback for creative burnout or impossible success criteria (plagiarism) has been swept away by Google - Plan B is recourse to Ritalin. Far-fetched? I'm not too sure. Nobody's doing the experiment (e.g. monitoring stimulant intake by pre-laureates). The tragedy is that it's the top-tier performers and the up-and-coming who end up fighting to stay clean and stay competitive, morally pushed to take the sucker's payoff and professionally pulled to get jazzed to get successful; witness <a href="http://www.sciam.com/article.cfm?id=the-doping-dilemma">competitive cycling over the last fifteen years</a>. It also brings to mind the communist bloc countries in the 70s and 80s seeking prestige from the Olympics by whatever pharmaceutical means; in this century, cognitive boosters can give your country--yes, yours!--a more direct and sustained advantage measurable in prestige, dollars, Nobels and economic transformation. And the ethics are less clear. I'm so upset by this I'm going for a coffee!]]>
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</entry>

<entry>
    <title>Forgive me Father for I have genetically modified</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/science_seen/forgive_me_father_for_i_have_genetically.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=747" title="Forgive me Father for I have genetically modified" />
    <id>tag:www.ortholog.com,2008://2.747</id>
    
    <published>2008-03-10T22:51:59Z</published>
    <updated>2008-03-10T23:11:18Z</updated>
    
    <summary>http://blogs.nature.com/news/thegreatbeyond/2008/03/genetic_modification_joins_lus.html...</summary>
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        http://blogs.nature.com/news/thegreatbeyond/2008/03/genetic_modification_joins_lus.html
        <![CDATA[<cite>Nature</cite> clarifies some Vatican comments. For a few hours today <a href="http://news.bbc.co.uk/2/hi/europe/7287071.stm">many</a> <a href="http://www.timesonline.co.uk/tol/comment/faith/article3517050.ece">news</a> <a href="http://thelede.blogs.nytimes.com/2008/03/10/seven-more-sins-thanks-to-vatican/?hp">sites</a> reported that the Catholic Church had added another 7 deadly sins to the <a href="http://en.wikipedia.org/wiki/Seven_deadly_sins">time-tested first batch</a>. These included &quot;carrying out morally debatable scientific experiments, or <strong>allowing genetic manipulations which alter DNA</strong> or compromise embryos&quot; [my emphasis]. However, it seems as though the process was something like this:
<ul>
<li>1. Senior Catholic agrees to interview</li>
<li>2. Interviewer asks Senior Catholic about his personal opinions on sin</li>
<li>&hellip;several steps here&hellip;</li>
<li>99. Newspaper front pages around the world proclaim new Catholic doctrine</li>
</ul>
It's usual for the Pope to set the policy in this area, allegedly after full consultation with his boss, but there's not much sign of that here. Not only would this have brought the scriptwriters of Se7en a very difficult challenge vis-a-vis the necessary sequel but one has to worry about the immortal souls of any genetic engineers who died without confession this morning, perhaps zapped by the electrophoresis powerpack while the stain of this morning's plasmid ligation was still on them (statistically likely, given the numbers). Anyway, the panic is now over and you can go back to your money-making, poverty-induced, genetically-modifying lives, people.<br /><br />
But why pick on sloths?]]>
    </content>
</entry>

<entry>
    <title>Snowmen with bug eyes</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/science_seen/snowmen_with_bug_eyes.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=746" title="Snowmen with bug eyes" />
    <id>tag:www.ortholog.com,2008://2.746</id>
    
    <published>2008-02-29T07:08:13Z</published>
    <updated>2008-02-29T07:17:18Z</updated>
    
    <summary>http://dx.doi.org/10.1126/science.1149757...</summary>
    <author>
        <name></name>
        
    </author>
    
        <category term="Science seen" />
    
    <content type="html" xml:lang="en" xml:base="http://www.ortholog.com/">
        http://dx.doi.org/10.1126/science.1149757
        <![CDATA[Air-borne microbes turn out to be at the cores and starting points of every snow particle. Although this is all below the tropopause, it reminds me of my <a href="/archive/in_response/the_biosphere_extends_to_the_stratospher.php">Extended Atmo-biosphere Theory</a>. It's interesting to speculate (unscientifically) on how important to the weather microbes might be. <a href="/archive/deserving_memes/caves_are_dug_by_microbes.php">Bugs dig caves</a>; could they drive the climate?]]>
    </content>
</entry>

<entry>
    <title>Air quotes</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/wikitrail/air_quotes.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=744" title="Air quotes" />
    <id>tag:www.ortholog.com,2008://2.744</id>
    
    <published>2008-02-12T19:23:47Z</published>
    <updated>2008-02-12T19:24:20Z</updated>
    
    <summary>http://en.wikipedia.org/wiki/Air_quotes...</summary>
    <author>
        <name></name>
        
    </author>
    
        <category term="Wikitrail" />
    
    <content type="html" xml:lang="en" xml:base="http://www.ortholog.com/">
        http://en.wikipedia.org/wiki/Air_quotes
        
    </content>
</entry>

<entry>
    <title>Genes with silly names should stay</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/science_seen/genes_with_silly_names_should_stay.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=743" title="Genes with silly names should stay" />
    <id>tag:www.ortholog.com,2008://2.743</id>
    
    <published>2008-02-11T19:12:37Z</published>
    <updated>2008-02-11T19:29:04Z</updated>
    
    <summary>http://dx.doi.org/10.1186/gb-2008-9-1-401...</summary>
    <author>
        <name></name>
        
    </author>
    
        <category term="Science seen" />
    
    <content type="html" xml:lang="en" xml:base="http://www.ortholog.com/">
        http://dx.doi.org/10.1186/gb-2008-9-1-401
        <![CDATA[Discussion paper about the prevalence of whimsy and wit in gene naming.  <a href="/archive/deserving_memes/lunatic_fringe_misidentified.php">I think the whimsy should stay</a>, and so do these authors. After all, pioneers in any given namespace have always done this: look at the names of towns in North America, for example (New York, <a href="http://en.wikipedia.org/wiki/Truth_or_Consequences,_New_Mexico">Truth Or Consequences</a>, etc), or the <a href="http://en.wikipedia.org/wiki/List_of_Crayola_crayon_colors">colours of Crayola crayons</a>.<br />
Arresting fact: &quot;North American cities, for instance, often share a corpus of conserved street names&quot;. What kind of Land Of The Free is that?! You've got the right to bear arms but not to name streets - how bizarre. Reminds me of the <a href="http://online.wsj.com/article/SB118247444843644288.html?mod=googlenews_wsj">now-abolished strictures on children's names in France</a>.]]>
    </content>
</entry>

<entry>
    <title>Six million dollar cockroach</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/science_seen/six_million_dollar_cockroach.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=741" title="Six million dollar cockroach" />
    <id>tag:www.ortholog.com,2008://2.741</id>
    
    <published>2008-01-22T03:15:50Z</published>
    <updated>2008-01-22T03:21:55Z</updated>
    
    <summary>http://en.rian.ru/science/20080117/97179313.html...</summary>
    <author>
        <name></name>
        
    </author>
    
        <category term="Science seen" />
    
    <content type="html" xml:lang="en" xml:base="http://www.ortholog.com/">
        http://en.rian.ru/science/20080117/97179313.html
        <![CDATA[Conceived and born in orbit then returned to Earth, these cockroaches outperform earthborn hatchmates in feats of strength and speed. Two questions: (1) does it work with endoskeletal organisms (Superman's origin would suggest otherwise - he needed to be born under Krypton's massive gravity in order to be strong on Earth), and (2) how much is this going to swell the advance bookings and increase the quarantine burden for <a href="http://www.virgingalactic.com">Virgin Galactic</a>?]]>
    </content>
</entry>

<entry>
    <title>It&apos;s okay to swing</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/science_seen/its_okay_to_swing.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=740" title="It's okay to swing" />
    <id>tag:www.ortholog.com,2008://2.740</id>
    
    <published>2008-01-02T22:53:25Z</published>
    <updated>2008-01-03T01:17:29Z</updated>
    
    <summary>http://www.edge.org/q2008/q08_index.html...</summary>
    <author>
        <name></name>
        
    </author>
    
        <category term="Science seen" />
    
    <content type="html" xml:lang="en" xml:base="http://www.ortholog.com/">
        http://www.edge.org/q2008/q08_index.html
        <![CDATA[It's that time of year again when the great and the good ponder/pontificate on demand for John Brockman. Last year it was <a href="http://www.edge.org/q2007/q07_index.html">perceived upsides</a>, in 2006 it was <a href="/archive/deserving_memes/whats_your_formulaequationalgorithm_asks.php">the quest for formulae</a>, 2005 sought<a href="http://www.nytimes.com/2005/01/04/science/04edgehed.html">unprovably true things</a>, and someone copied the idea to find <a href="archive/siteseeing/if_you_could_teach_the_world_just_one_th.php">the best scientific nutshell</a>. This year's <a href="http://edge.org">Edge</a> question is &quot;What have you changed your mind about?&quot;. Standouts this time round for me include:
<ul>
<li><a href="http://www.edge.org/q2008/q08_1.html#ledoux">Joseph Ledoux</a> on the arresting fact that memories are one-time-access only, yes they are</li>
<li><a href="http://www.edge.org/q2008/q08_1.html#hoffman">Donald Hoffman</a> on how being fundamentally mistaken about many things is baked into our psychology, has been for thousands of generations</li>
<li><a href="http://www.edge.org/q2008/q08_3.html#taylor">Timothy Taylor</a> on the correct dosage of relativism: you can have not enough, of course, but also too much</li>
<li><a href="http://www.edge.org/q2008/q08_3.html#provine">Robert Provine</a> on the benefits of the random walk through science, sans hypothesis. Go fish!</li>
<li><a href="http://www.edge.org/q2008/q08_4.html#fisher">Helen Fisher</a> on her idea that serial monogamy with four-yearly itches was the human ancestral mating strategy</li>
<li><a href="http://www.edge.org/q2008/q08_6.html#sampson">Scott Sampson</a> on his early doubts about the extinction of the dinosaurs: 27 years on from the Alvarezes paper the data just keeps backing it up</li>
<li><a href="http://www.edge.org/q2008/q08_7.html#gilbert">Daniel Gilbert</a> on the previously unrealised benefits of not being able to change your mind</li>
<li><a href="http://www.edge.org/q2008/q08_8.html#brand">Stewart Brand</a> claims that old is crap, mostly, while new is mostly not as crap so embrace it</li>
<li><a href="http://www.edge.org/q2008/q08_8.html#haidt">Jonathan Haidt</a> on his baffled acceptance of the benefits of joining clubs and talking sports statistics with your mates</li>
<li><a href="http://www.edge.org/q2008/q08_9.html#wrangham">Richard Wrangham</a> on his Road to Damascus moment that, while meat protein might be the power-diet that got our ancestors from <em>Australopithecus</em> to <em>Homo habilis</em>, it must be cooking that gets us from <em>habilis</em> to <em>erectus</em></li>
<li><a href="http://www.edge.org/q2008/q08_11.html#christakis">Nicholas Christakis</a> on how genes are not the background on which culture is painted but that there is a dialogue or two-way influence going on</li>
<li><a href="http://www.edge.org/q2008/q08_11.html#campbell">Phillip Campbell</a> on how he would now be happy to use cognitive enhancement drugs under certain conditions</li>
<li><a href="http://www.edge.org/q2008/q08_11.html#goleman">Daniel Goleman</a> is now questioning the correlation between mental effort and achievement</li>
<li><a href="http://www.edge.org/q2008/q08_11.html#gigerenzer">Gerd Gigerenzer</a> now thinks that statistical illiteracy in the medical profession, contributing many deaths and even more misunderstandings, is at last on the decline</li>
<li><a href="http://www.edge.org/q2008/q08_13.html#dyson">Esther Dyson</a> now thinks that online privacy is not what people really want</li>
<li><a href="http://www.edge.org/q2008/q08_14.html#saffo">Paul Saffo</a> forecasts that the only valid forecasts will soon come from computers</li>
<li><a href="http://www.edge.org/q2008/q08_14.html#gopnik">Alison Gopnik</a> now thinks that science and fiction are facets our outcomes of the same thing</li>
<li><a href="http://www.edge.org/q2008/q08_15.html#bering">Jesse Bering</a> now rejects all superstition yet, for well-explained psychological reasons, outlines how superstitious he and others can be</li>
<li><a href="http://www.edge.org/q2008/q08_15.html#bingham">Roger Bingham</a> had a crisis of faith in his chosen religion (evolutionary psychology) and so went off and founded his own (which is technically different but looks similar from a distance)</li>
<li><a href="http://www.edge.org/q2008/q08_16.html#shirky">Clay Shirky</a> on his realisation that non-overlapping magisteria are bogus, that one cannot be a religious scientist in all non-dissonant honesty</li>
</ul>]]>
    </content>
</entry>

<entry>
    <title>Public domain day</title>
    <link rel="alternate" type="text/html" href="http://www.ortholog.com/archive/science_seen/public_domain_day.php" />
    <link rel="service.edit" type="application/atom+xml" href="http://www.ortholog.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=2/entry_id=739" title="Public domain day" />
    <id>tag:www.ortholog.com,2008://2.739</id>
    
    <published>2007-12-31T21:02:40Z</published>
    <updated>2008-01-02T21:42:30Z</updated>
    
    <summary>http://everybodyslibraries.com/2008/01/01/public-domain-day-gifts/...</summary>
    <author>
        <name></name>
        
    </author>
    
        <category term="Science seen" />
    
    <content type="html" xml:lang="en" xml:base="http://www.ortholog.com/">
        http://everybodyslibraries.com/2008/01/01/public-domain-day-gifts/
        <![CDATA[For those of us in <a href="">life+50 countries</a>, we <a href="http://en.wikipedia.org/wiki/Public_domain">may now mess around freely</a> with the formerly-copyrighted works of <a href="http://en.wikipedia.org/wiki/Dorothy_L_Sayers">Dorothy L.Sayers</a>, <a href="http://en.wikipedia.org/wiki/Sibelius">Sibelius</a>, <a href="http://en.wikipedia.org/wiki/Laura_Ingolls_Wilder">Laura Ingolls Wilder</a>, <a href="http://en.wikipedia.org/wiki/Lord_Dunsany">Lord Dunsany</a>, <a href="http://en.wikipedia.org/wiki/Oliver_Hardy">Oliver Hardy</a> and others. In the science world, the works of two Nazi-sympathizing Nobel laureates (<a href="http://en.wikipedia.org/wiki/Walther_Bothe">Bothe</a> and <a href="http://en.wikipedia.org/wiki/Johannes_Stark">Stark</a>), two more laureates (<a href="http://en.wikipedia.org/wiki/Irving_Langmuir">Langmuir</a>, who also coined the phrase &quot;<a href="http://en.wikipedia.org/wiki/Pathological_science">pathological science</a>&quot;, and <a href="http://en.wikipedia.org/wiki/Gerty_Cori">Cori</a>) ,and <a href="http://en.wikipedia.org/wiki/Henry_Norris_Russell">Russell</a> (of diagrammatic fame) and entered the public domain. 2005 had a <a href="/archive/deserving_memes/einstein_famous_dead_and_occasionally_ou.php">more interesting crop sciencewise</a>. 2006 was sparser but gave us A.A.Milne and <a href="http://en.wikipedia.org/wiki/Alfred_Kinsey">Alfred Kinsey</a>, otherwise so rarely shelved together.<br />
Next year we get <a href="http://en.wikipedia.org/wiki/Rosalind_Franklin">Franklin</a> and <a href="http://en.wikipedia.org/wiki/Wolfgang_Ernst_Pauli">Pauli</a>, amongst others.]]>
    </content>
</entry>

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